Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIQIHHANAFEIIKDFHQQNLKVDAIITDPPYNISVKNNFSTLKSAKRQGIDFGEWDKNFKLLEWIARYAS----LINPNGCMVIFCSYRF---------ISYIADFLEENGFVVKDFIQWVKNNPMPRNIHRRYVQDTEFALWAVKKKAKWVFN-----KPKNEK----YLRPLILKSPVV-----------------SGIERVKHPTQKSLTLMEKIISTHTNPNDTVLDPFMGSGTTGLACKNLKRNFIGIESE---KEYFQIAQKRLS |
1NW5 Chain:A ((59-281)) | ----------------------VQLIICDPPYNIML-----------------ADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGEAGSGDLISIISHMRQNSKMLLANLIIW--NYPNGMSAQRFFANRHEEIAWFAKTK-KYFFDLDAVREPYDEETKAAYMKDKRLNPESVEKGRNPTNVWRMSRLNGNSLERVGHPTQKPAAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1NW5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -79155 for 1226 contacts (-64.6/contact) +
2D Compatibility (PS) -19142 + (NN) -5635 + (LL) 3428
1D Compatibility (HY) -11600 + (ID) 3100
Total energy: -115204.0 ( -93.97 by residue)
QMean score : 0.439
|
|
|