Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFGKSSNDTQENPKDALKSTNFHEKHTKPTETTELVEENKALTTEKERLERENKNLTADKENLTKEKTELQKQVNELKNSKQVLENEKADWLREKENLTKDRENLTKEKTELTEKNKVLTTEKERLATEKENLTKEKTESQKQVNELKNSKQVLEN---EKADLTNENTKLKTDKTDLTEKNQRLT--TEKTELNNKITGLATEKERLAADKENLTKESRQRKPN |
3LVH Chain:D ((91-203)) | -------------------------------------------------------------------------------------------------------------------------QADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKA------------KKDLEEWNQRQSEQVEKNKINNRIA-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18560 for 232 contacts (80.0/contact) +
2D Compatibility (PS) -6361 + (NN) -1015 + (LL) 9944
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: 16628.0 ( 71.67 by residue)
QMean score : 0.535
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