Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMTKNAYAFVVIEKSIMVFKCAKDKGLIPITEGFVPLKEGFLRSFKERCNLDFLENLDLLFLYDYQFPS-EVFSLCKDLKNSIWDRKLVVVLVEALEGFKGLNLSLKIEDRHSNSLGNGVQKLLTNADLGSNHKPIVIDSMKTYHQSQQEKYKRERGETLEVRPTTPPSYGGGSIRISGDKKPDSNEENF
2V0N Chain:A ((48-86))
-----------------------------------------------------------IILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTRFKLVIDELRQREASGRRMGVIAGAAARLDGLGGRVLIVDDNERQAQRVAAELGVEHRP
General information:
TITO was launched using:
RESULT:
Template:
2V0N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23859 for 182 contacts (-131.1/contact) +
2D Compatibility (PS) -4137 + (NN) -2703 + (LL) 4820
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -31379.0 ( -172.41 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_2V0N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V0N-query.scw
PDB file :
Tito_Scwrl_2V0N.pdb
: