Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIFLGMALAFSVSMAEKSGAFLGGGFQYSNLENQNTTRTPSANNNTPINTSMFGNNQAAPAQETPSVINTNNYGQMYGVDAMAGYKWFFGKTKRFGFRTYGYYSYNHANLSFVGSKLGIMDGASQVNNFTYGVGFDALYNFYESKEGYNTAGLFVGFGLGGDSFIVQGESYLKSQMQICNNTAGCSASMNTSYFQMPVEFGFRSNFSKHSGIEVGFKLPLFTNQFYKERGVDGSVDVFYKRNFSIYFNYMINL |
4WB0 Chain:B ((129-179)) | --------------------------------------------------------------AEKTPIYLADPTWPNHYSIVKAAGWK---------DIRTYAYYDHKTLGLDFEGMKKDILAAPDGSVFLLHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIRAEYTCPPAHGARLAHLILS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2815 for 280 contacts (-10.1/contact) +
2D Compatibility (PS) -5350 + (NN) -1292 + (LL) 3336
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -10571.0 ( -37.75 by residue)
QMean score : 0.002
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