Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKEQEAQEIAKKAVKIVFFLGLVVVLLMMINLYMLINQINASAQMSHQIKKIEERLNQEQK
1V54 Chain:G ((6-38))
---GDHGGTGARTWRFLTFGLALPSVALCTLNSWLHSGHRERPAFIPYHHLRIRTKPFSWGD
General information:
TITO was launched using:
RESULT:
Template:
1V54.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8833 for 137 contacts (-64.5/contact) +
2D Compatibility (PS) -3279 + (NN) -3156 + (LL) 392
1D Compatibility (HY) 0 + (ID) 350
Total energy: -15226.0 ( -111.14 by residue)
QMean score : 0.113
(partial model without unconserved sides chains):
PDB file :
Tito_1V54.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V54-query.scw
PDB file :
Tito_Scwrl_1V54.pdb
: