Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFLNDHINVFGLIAALVILVLTIYESSSLIKEMRDSKSQGELMENGHLIDGIGEFANNVPVGWIASFMCVIVWAFWYFFFGYPLSSFSQIGQYNEEVKAHNQKFEAKWKHLGQKELVDMGQGIFLVHCSQCHGITADGLHGSAQNLLRWDKEEGIMDTIKHGSKGMDYPAGEMPAIEMDEKDAKAIASYVMAELSSVKKTKNPQLIDKGKELFESMGCAGCHGNDGK--GLQENQVFAADLTTYGTESFLRNILTHGKKGNIGRMPSFKYKNFSDLQVKALVEFIKSLKPLED |
1CCH Chain:A ((3-82)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEALFKSKPCAACHSVDTKMVGPALKEVAAKNAGVEGAADTLALHIKNGSQGVWGPIP-MPPNPVTEEEAKILAEWVLSLK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CCH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14832 for 516 contacts (-28.7/contact) +
2D Compatibility (PS) -8848 + (NN) -7187 + (LL) 14568
1D Compatibility (HY) -1600 + (ID) 1250
Total energy: -19149.0 ( -37.11 by residue)
QMean score : 0.309
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