Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFLNGLAGNLLIVVILLCVVVFFALKAIHIQKEQATNYYRYKDINALEAKNTQNHANYELVNQGSKK
2KNC Chain:B ((694-718))----LVVLLSVMGAILLIGLAALLIWKLL---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2KNC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14183 for 93 contacts (-152.5/contact) +
2D Compatibility (PS) -2556 + (NN) -2844 + (LL) 3124
1D Compatibility (HY) -2800 + (ID) 100
Total energy: -19359.0 ( -208.16 by residue)
QMean score : 0.341

(partial model without unconserved sides chains):
PDB file : Tito_2KNC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KNC-query.scw
PDB file : Tito_Scwrl_2KNC.pdb: