Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKGLWLVISLVFVGFLWANESYVFNNSKGRLTEKSVAFIEGVSKELYLKTGVRFAIDMTDFEKNPIALANKKERQSYQEGFLKQLKPPFVVFFFYHDAQKIELVANPKDLLDTDKIF--------FEKIAPLLPTNAKEYTPQRISAMLINGYSVAVDALAEKYHVNITQNFSAPKGVTFVKVVIYILLLTLLGAFLGLYFFKKS |
3FQD Chain:A ((636-730)) | --------------------------------------------------------------------------------------PSWTWYYPYHYA---PFAADFKDLASIDVKFELNQPFKPYEQLLGVLPAASKNNLPEKLQTLMTDENSEIIDFYPENFTIDLNGKKFEWQGVALLPFIDENRLLNAVSKIYPQLTEEES |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FQD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18939 for 411 contacts (-46.1/contact) +
2D Compatibility (PS) -8606 + (NN) 1028 + (LL) 7248
1D Compatibility (HY) -6000 + (ID) 1000
Total energy: -26269.0 ( -63.91 by residue)
QMean score : 0.142
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