Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKEKNFWPLGIMSVLIFGLGIVVFLVVFALKNSPKNDLVYFKGHNEVDLNFNAML-KTYENFKSNYRFSVGLKPLTESPKTPILPYFSKGTHGDKKIQENLLNNALILEKSNTLYAQLQPLKPALDSPNIQVYLAFYPSQSQPRLLGTLDCKNACEPLKFDLLEGDKVGRYKILFKFVFKNKEELILEQLAFFK
2X42 Chain:A ((375-440))---------------------------------PRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRR-----IIKPKLPENFLSEKEIHKLAKKNDVAVIVISRISGEGYDRKPVKGDFYLSDDETDLIKTVSREFHEQGKKVIVLLNIGSPVEVVSWRDLVDGILLVWQAGQETGRIVADVLTG


General information:
TITO was launched using:
RESULT:

Template: 2X42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1117 for 268 contacts (-4.2/contact) +
2D Compatibility (PS) -6261 + (NN) -3195 + (LL) 3172
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -10301.0 ( -38.44 by residue)
QMean score : 0.170

(partial model without unconserved sides chains):
PDB file : Tito_2X42.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2X42-query.scw
PDB file : Tito_Scwrl_2X42.pdb: