Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKEGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSK-EG-NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKSEVENLKLSLEDLEFALIDYGLEELEEVGDKIIIRGDYNSFKLLNEGFESLRLPIIKAGLQRIATTPIELNDEQM-ELTEKLLDRIEDDDDVVALYTNIE |
| 1LFP Chain:A ((20-239)) | -----------------QRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKANMPWENIERAIKKGAGELEGEQFEEVIYEGYAPGGVAVMVLATTDNRNRTTSEVRHVFTK-HGGNLGASGCVSYLFERKGYIEVPAKEV-----SEEELLEKAIEVGAEDVQPGEEVHIIYTVPEELYEVKENLEKLGVPIEKAQITWKPISTVQINDEETAQKVIKLLNALEELDDVQQVIANFE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 68422 for 1628 contacts (42.0/contact) +
2D Compatibility (PS) -23191 + (NN) -8705 + (LL) 2000
1D Compatibility (HY) 9600 + (ID) 1750
Total energy: 46376.0 ( 28.49 by residue)
QMean score : 0.223
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