Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRFSIFFKVVALFMITLFSFGAFAYYFVSSQISHENYQNEMRHYQFVTTINEILNNYSDYRAIEDYLYKIGFRETTIENLEKVLAKRRHQLHHRNIWYAEVFKFSDMVFILLKKDEHFVLYKDLHSVSYRNYFLAITVGLLLILFLFLFVLQSLLPLRELRSQVKRFAQGDKSVSCKSKQKDEIGD-LANEFDNCIQKINAMNESRVLFLRSIMHELRTPITKGKILSSMLKE-----------ELSCKRFSSIFDHLNMLIEQFARIEQLASKNYGSNKEKFLMSDLID----KIEKMLLIDEDKKSPIHVSSSNYIIEADFELFAIALKNMIDNAIKYSDDK---QVFLDFIGNNLVVSNKSKPL-KEDFEKYLQPYFKS-SNPSQAHGFGLGMYIIKNALEAMGLNLSYHYSNGRICFTIHDCVFNSFYDLEADNEELPPPRKFERGEGNEGNRKSQLWG |
| 4BIY Chain:A ((61-270)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGASFNQVVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDL-LVMSRNQQKNALVSETIKANQ---LWSEVLDNAAFEAEQM-----GKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTD--------TGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYKR-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48613 for 1068 contacts (-45.5/contact) +
2D Compatibility (PS) -18818 + (NN) -6861 + (LL) 19616
1D Compatibility (HY) -12000 + (ID) 2300
Total energy: -68976.0 ( -64.58 by residue)
QMean score : 0.304
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