Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVVTIERMESRINRLSAKIDALLEQQKKVISLLETYLSVYSTPQEASNKLFKGISQGMELA---PEIAQED---EEKRLYVLQYLSHVDITKNKQDSQLKKDCLEFIQRFNIPKPIIVTALYNLKGIKPTKKEVAKQLQKLYVWERRYQQGGIDALKDRRGRPLKKP |
3K02 Chain:A ((318-385)) | ---------------SAKVQ---QQTTEKLSLLPTRTSVYEVPSVADNEMVKFFKPAVDKAVERPWIAEGNALFEPIRLQMANVLSGETSPDEAAANTGDAYRKLLKDYK--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15117 for 313 contacts (48.3/contact) +
2D Compatibility (PS) -6480 + (NN) -2999 + (LL) 6896
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: 7734.0 ( 24.71 by residue)
QMean score : 0.009
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