Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTFEILKHLQADAIVLFMKVHNFHWNVKGTDFFNVHKATEEIYEGFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKEETKTSFHSKDIFKEILEDYKHLEKEFKELSNTAEKEGDKVTVTYADDQLAKLQKSIWMLEAHLA
4EVB Chain:A ((22-164))
-KTFEILKHLQADAIVLFMKVHNFHWNVKGTDFFNVHKATEEIYEGFADMFDDLAERIAQLGHHPLVTLSEALKLTRVKEETKTSFHSKDIFKEILEDYKHLEKEFKELSNTAEKEGDKVTVTYADDQLAKLQKSIWMLQAHLA
General information:
TITO was launched using:
RESULT:
Template:
4EVB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42188 for 1073 contacts (-39.3/contact) +
2D Compatibility (PS) -15651 + (NN) -10958 + (LL) 208
1D Compatibility (HY) -19200 + (ID) 7000
Total energy: -94789.0 ( -88.34 by residue)
QMean score : 0.655
(partial model without unconserved sides chains):
PDB file :
Tito_4EVB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EVB-query.scw
PDB file :
Tito_Scwrl_4EVB.pdb
: