Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKFASVLVQLKTLALEKIERKLESKRLELQQNEREVLDKQAQLSAFKNPELGGMSLFLQTQQLKSALRMEIEYYQQEGENLTKDLKILEKDYLLANQELEKAKIILEKEKQKEKEILEKKEQALLDENAMILHWQKGGLHA
4CGK Chain:A ((42-106))
-----------------------SNLTAQQQEAQKQVDQIQEQVSA------------IQAEQ--SNLQAENDRLQAESKKLEGEITELSKNIVSRNQSLEKQARSAQTNGAVTSYINTIVNSKSITEAISRVAAMSEIVSA
General information:
TITO was launched using:
RESULT:
Template:
4CGK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11544 for 258 contacts (44.7/contact) +
2D Compatibility (PS) -7536 + (NN) -6389 + (LL) 3508
1D Compatibility (HY) -1200 + (ID) 1050
Total energy: -1123.0 ( -4.35 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_4CGK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CGK-query.scw
PDB file :
Tito_Scwrl_4CGK.pdb
: