Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFDNTLINLFETAPLLTSLLAGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGFSLVFLGVGMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAFLYKTQSVGLASKSNSMQRFYPFLLGMSFALGWTPCIGPIFTSIVIMSASKDAYGLMLMVVFVMGLAIPFLLVALMLERALLFLKSLRKYNRAIEIVSGLVLILMGILIMTNSLESLTNFLQN |
2Y69 Chain:L ((39-56)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMMTLFFGSGFAAPFFIV-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9596 for 66 contacts (-145.4/contact) +
2D Compatibility (PS) -1493 + (NN) 2272 + (LL) 18536
1D Compatibility (HY) -2000 + (ID) 350
Total energy: 7369.0 ( 111.65 by residue)
QMean score : -0.101
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