Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQEILIPLKEKSYKVFLGELPEIKLKQKALIISDSIVAGLHLPYLLERLNALEVRVCV---------IESGEKYKNFHSLERILNNAFEMQLNRHSLMIALGGGVISDMVGFASSIYFRGIDFINIPTTLLAQVDASVGGKTGINTPYGKNLIGSFHQPKAVYMDLAFLKTLEKREFQAGVAEIIKMAVCFDKNLVERLET------KDLKDCLEEVIFQSVNIKAQVVVQDEKERNIRAGLNYGHTFGMLIENETNYERFLHGEAIAIGMRMANDLALSLGMLTLKEYERIENLLKKFDLIFNYQITDIQKFYERLFLDKKSENQTLKFILPKGVGAFEIASHIPKETILKVLEKWH
3QBD Chain:A ((46-344))------------------------------------VAVVHQPGLAETAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGGGAATDVAGFAAATWLRGVSIVHLPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPLAVLVDLATLQTLPRDEMICGMAEVVKAGFIADPVILDLIEADPQAALDPAGDVLPELIRRAITVKAEVVAA-----ELREILNYGHTLGHAIERRERY-RWRHGAAVSVGLVFAAELARLAGRLDDATAQRHRTILSSLGLPVSYDPDALPQLLEIMAG-------VLRFVVLDGLAKPGRMVGPDPGLLVTAYAGVC


General information:
TITO was launched using:
RESULT:

Template: 3QBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -182817 for 2226 contacts (-82.1/contact) +
2D Compatibility (PS) -28754 + (NN) -5109 + (LL) 4044
1D Compatibility (HY) -19200 + (ID) 5000
Total energy: -236836.0 ( -106.40 by residue)
QMean score : 0.430

(partial model without unconserved sides chains):
PDB file : Tito_3QBD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QBD-query.scw
PDB file : Tito_Scwrl_3QBD.pdb: