Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQEILIPLKEKSYKVFLGELPEIKLKQKALIISDSIVAGLHLPYLLERLNALEVRVCV---------IESGEKYKNFHSLERILNNAFEMQLNRHSLMIALGGGVISDMVGFASSIYFRGIDFINIPTTLLAQVDASVGGKTGINTPYGKNLIGSFHQPKAVYMDLAFLKTLEKREFQAGVAEIIKMAVCFDKNLVERLET------KDLKDCLEEVIFQSVNIKAQVVVQDEKERNIRAGLNYGHTFGMLIENETNYERFLHGEAIAIGMRMANDLALSLGMLTLKEYERIENLLKKFDLIFNYQITDIQKFYERLFLDKKSENQTLKFILPKGVGAFEIASHIPKETILKVLEKWH |
3QBD Chain:A ((46-344)) | ------------------------------------VAVVHQPGLAETAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGGGAATDVAGFAAATWLRGVSIVHLPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPLAVLVDLATLQTLPRDEMICGMAEVVKAGFIADPVILDLIEADPQAALDPAGDVLPELIRRAITVKAEVVAA-----ELREILNYGHTLGHAIERRERY-RWRHGAAVSVGLVFAAELARLAGRLDDATAQRHRTILSSLGLPVSYDPDALPQLLEIMAG-------VLRFVVLDGLAKPGRMVGPDPGLLVTAYAGVC |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182817 for 2226 contacts (-82.1/contact) +
2D Compatibility (PS) -28754 + (NN) -5109 + (LL) 4044
1D Compatibility (HY) -19200 + (ID) 5000
Total energy: -236836.0 ( -106.40 by residue)
QMean score : 0.430
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