Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MISNISIHPKTMFKNALNIQDFSFKNHTSTAIIGTNGAGKSTLINTILGIRSDYNFKAQNNNIPYHDNVI-----PQRKQLGVVSNLFNYPPGLNANDLFKFYQFFHKNCTLDLFEK------------NLLNKTYEHLSDGQKQRLKIDLALSHHPQLVIMDEPETSLEQN-ALIRLSNLISLRNTQQLTSIIATHDPI-VLDSCEWVLLLKNGNIAQYKPLNSILKSVAKTFNFKEKPTTKDLLALLKDI |
| 2YYZ Chain:A ((18-229)) | ---------------AVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGI-----YKPTSGEI-YFDDVLVNDIPPKYREVGMVFQNYALYPHMTVFENIAF-PLRARRISKDEVEKRVVEIARKLLIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQELGITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDSPKNMFVASFIGNPPTNFLRDFSV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YYZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91666 for 1376 contacts (-66.6/contact) +
2D Compatibility (PS) -20549 + (NN) -8082 + (LL) 988
1D Compatibility (HY) -12800 + (ID) 2650
Total energy: -134759.0 ( -97.94 by residue)
QMean score : 0.411
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