Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLNRIIEHMNAHHVEDMKGLLKKFGQVHHAENVAFKSVDPQGIVIGYNNNQTLRIEFNHEVKDPKDYKNAIIELCQSVEKTHDLKGVEEEVKAFRKDFDSVCLATLHPNGHVVCSYAPLMTDGKQYYIYVSEVAEHFAGLKNNPHNVEVMFLEDESKAKSAILRKRLRYKTNARFIERGAEFDKAFDSFIEKTGGAGG--IKTIRTMQDFHLIALDFKEGRFVKGFGQAYDILGDKIAYVGDKGNPHNFAHKK |
| 3TGV Chain:A ((3-139)) | --------------------------------------------------------------------------------------LEPEIKEFRQERKTLQLATVDAQGRPNVSYAPFVQNQEGYFVLISHIARHARNLEVNPQ-VSIMMIEDETEAKQLFARKRLTFDAVASMVERDSEL---WCQVIAQMGERFGEIIDGLSQLQDFMLFRLQPEQGLFVKGFGLEH----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81558 for 960 contacts (-85.0/contact) +
2D Compatibility (PS) -14875 + (NN) -4779 + (LL) 6668
1D Compatibility (HY) -13600 + (ID) 2550
Total energy: -110694.0 ( -115.31 by residue)
QMean score : 0.515
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