Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLFD--FFKNKGSAATATDRLKLILAKERTL--NLP-YMEEMRKEIIAVIQKYTKSSDIHFKTLDGNQ-SVETIEVEIILPK
2KXO Chain:A ((1-83))
MSLIELLFGRKQKTATVARDRLQIIIAQERAQEGQTPDYLPTLRKALMEVLSKYVNVSLDNIRISQEKQDGMDVLELNITLPE
General information:
TITO was launched using:
RESULT:
Template:
2KXO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9859 for 385 contacts (-25.6/contact) +
2D Compatibility (PS) -8302 + (NN) -608 + (LL) 0
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -26469.0 ( -68.75 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_2KXO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KXO-query.scw
PDB file :
Tito_Scwrl_2KXO.pdb
: