Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRADNRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLGTND
3H1G Chain:A ((6-128))
MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLGTN-
General information:
TITO was launched using:
RESULT:
Template:
3H1G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66551 for 970 contacts (-68.6/contact) +
2D Compatibility (PS) -13684 + (NN) -9303 + (LL) -76
1D Compatibility (HY) -18400 + (ID) 6000
Total energy: -114014.0 ( -117.54 by residue)
QMean score : 0.780
(partial model without unconserved sides chains):
PDB file :
Tito_3H1G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H1G-query.scw
PDB file :
Tito_Scwrl_3H1G.pdb
: