Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYFKILATSFSLFLNSWLKRSKLSSVPFLSKRQISKSVQAIKIDANNKAIKYPPSVDNTVHNRMLSGSLNFNTENTNPKKNPTTTEKWIKF
1P9K Chain:A ((16-54))
------GKHPHVELCDLLKLE----GWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA-----------------
General information:
TITO was launched using:
RESULT:
Template:
1P9K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6400 for 207 contacts (30.9/contact) +
2D Compatibility (PS) -4034 + (NN) -817 + (LL) 1812
1D Compatibility (HY) 400 + (ID) 250
Total energy: 3511.0 ( 16.96 by residue)
QMean score : 0.103
(partial model without unconserved sides chains):
PDB file :
Tito_1P9K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P9K-query.scw
PDB file :
Tito_Scwrl_1P9K.pdb
: