Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLVSLIVALVFCCFLGAVELPGVYQTQEFLYMKSSFVEFFEHNGKFYAYGISDVDGS-KAKKDKLNPN-----PKLRNRSDKGVVFLSDLIKVGEQSYKGGKAYNFYDGKTYHVRVTQNSNGDLEFTSSYDKWGYVGKTFTWKRLSDEEIKNLKLKRFNLDEVLKTLKDSPI |
2FUE Chain:A ((19-74)) | -----------------------------------------------------DVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FUE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7073 for 258 contacts (27.4/contact) +
2D Compatibility (PS) -5333 + (NN) -2077 + (LL) 4792
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: 1055.0 ( 4.09 by residue)
QMean score : 0.393
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