Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYKVADIFCGAGGLSYGFSTHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHCHNLPRVPIDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFK-QKFYFP-------------------------KP-IKTHFSLKDALGDLPPIQSGENGDALGYLKNADNVFLEFVRNSKE------LSEHSSPK------------NNEKLIKIMQT-LKDGQSKDDL--------------PESLRPK--SG---------------YINTYAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSANAKRLQIGNAVPPLLSAALAHAVFDFLRGKNV
4FT4 Chain:B ((380-737))------------------------------------------------------------------VDVICGGPPCQGISGFNRYRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDETQKPSLKKALLLGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKDMLDWSFGEGAGPDEGKLLDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVRVGANNIVEWDPEIERVKLSSGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTR-AEPHNQVIIHPTQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNAVAVPVARALGYCLGQAYLGESE


General information:
TITO was launched using:
RESULT:

Template: 4FT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72946 for 1994 contacts (-36.6/contact) +
2D Compatibility (PS) -30221 + (NN) -19708 + (LL) 4336
1D Compatibility (HY) -24400 + (ID) 4850
Total energy: -147789.0 ( -74.12 by residue)
QMean score : 0.424

(partial model without unconserved sides chains):
PDB file : Tito_4FT4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FT4-query.scw
PDB file : Tito_Scwrl_4FT4.pdb: