Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQQGYLNISHLATSLFVPLIEESILEGELLETCMHYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKNNACTFPKVEFHASGDVIWLERQAKEWLKL
2JFY Chain:A ((1-255))
MKIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQQGYLNISHLATSLFVPLIEESILEGELLETCMHYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKNNACTFPKVEFHASGDVIWLERQAKEWLKL
General information:
TITO was launched using:
RESULT:
Template:
2JFY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -253874 for 2265 contacts (-112.1/contact) +
2D Compatibility (PS) -27118 + (NN) -10303 + (LL) 0
1D Compatibility (HY) -42000 + (ID) 12750
Total energy: -346045.0 ( -152.78 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_2JFY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JFY-query.scw
PDB file :
Tito_Scwrl_2JFY.pdb
: