Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGIIYLILFLIVIYLLYRILDVLEQK
2QJY Chain:B ((234-250))
--VMFLTVLSVLLYLTNKRLWAGVK-
General information:
TITO was launched using:
RESULT:
Template:
2QJY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13471 for 61 contacts (-220.8/contact) +
2D Compatibility (PS) -1758 + (NN) -1343 + (LL) 212
1D Compatibility (HY) -2400 + (ID) 150
Total energy: -18910.0 ( -310.00 by residue)
QMean score : 0.867
(partial model without unconserved sides chains):
PDB file :
Tito_2QJY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QJY-query.scw
PDB file :
Tito_Scwrl_2QJY.pdb
: