Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEIL-GVDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGVYKQ-LNYVYDTISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLEFSWDYLKKISKELKKRY--AHIPVILFPKGIGAYLDSI-DGEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLY-DKNALEEGVEKILKVMG-NQGHIFNLGHGMLPDLPRENAKYLVQLVHAKTRR |
| 4WSH Chain:A ((17-355)) | --FLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPLDRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEQDLGYVMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHALLDKLAQSVTSYLNGQIHAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDGRRVPVILFTKGGGLWLESMAEVGAEALGLDWTCDIGSARARVGERVALQGNMDPSVLYANPAAIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHAGAFFEAVHELSAQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -258424 for 2956 contacts (-87.4/contact) +
2D Compatibility (PS) -35918 + (NN) -13068 + (LL) 412
1D Compatibility (HY) -32000 + (ID) 7650
Total energy: -346648.0 ( -117.27 by residue)
QMean score : 0.603
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