Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTMNAIRWPKKWIPGETDNFVSNEVIVKGLDFNKVVQHLRDASHWEKYYKNSGNIHMYH-QDNTILKDKTRFCFETFGFLVE--AEVEEFELKDAILRLAWRG----WNEAKGDEYLEVYHAWLVEKLDNDRVRILTQESQSGVPAKALAKSVPNAMLNGHQAWLDGLVAYSR
2BH4 Chain:X ((4-97))
-----------------------------------------DAAKGEKEFNKCKACHMVQAPDGTDIVKGGKTGPNLYGVVGRKIASVEGFKYGDGILEVAEKNPDMVWSEADLIEYVTDPKPWLVEKTGDSAAKTKKTFKLGKNQADVVAFLAQHSPDAG-------------
General information:
TITO was launched using:
RESULT:
Template:
2BH4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12799 for 512 contacts (-25.0/contact) +
2D Compatibility (PS) -9166 + (NN) -2072 + (LL) 3728
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -24859.0 ( -48.55 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_2BH4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BH4-query.scw
PDB file :
Tito_Scwrl_2BH4.pdb
: