Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIGWIGLGAMGTPMATRLRDAGLEVSVYNRTESKAAPLKEKGVAVYTSPIDLAAKVDLVFTMLSDKAAIDAVLAPK--FWEQMSK-KIVVNMSTIAPLESLSLEKIAQKHQATYLEAPVSGSVGAAKAGALLILAAGDEEVISKLKPVLAHLGSQTFYLGKVGQGTGAKLSINSLLAQMGVAYSEALLLAKRLGVDAESFLQIIGQSGMNSPLFQAKKGMWLQDNYPAAFSLKLMAKDIRLAKNEAGEAMKLPFLFQ--AEELYSQAEKSGLGGLDMAAVYHYLEKGEH |
3PEF Chain:A ((3-287)) | -KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSGSKKPAEDGTLIILAAGDRNLYDEAMPGFEKMGKKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGAMANPMFALKGGLIRDRNFAPAFPLKHMQKDLRLAV-ALGDRVGQPLVASAAANELFKGARAAGFGDEDFSAIFKTYER--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180481 for 2458 contacts (-73.4/contact) +
2D Compatibility (PS) -31157 + (NN) -17160 + (LL) 104
1D Compatibility (HY) -22000 + (ID) 4900
Total energy: -255594.0 ( -103.98 by residue)
QMean score : 0.471
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