Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHHTPM-----NTPLKLSVQALERYFLGQLFEFDAPL----DLIGTFFQKQVWSALMTIPYGKTKSYDEIAKLINNPKSCRAIGNANRNNPISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNERAKNFLIS
1SFE Chain:A ((42-175))
-------------------------------DDDATLISELQQMFPAADNAPADLMFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVWQALRTIPCGETVSYQQLANAIGKPKAVRAVASACAANKLAIVIPCHRVVRGDGSLSGYRWGVSRKAQLLRREAEN-----------
General information:
TITO was launched using:
RESULT:
Template:
1SFE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31329 for 796 contacts (-39.4/contact) +
2D Compatibility (PS) -13655 + (NN) -6084 + (LL) 3672
1D Compatibility (HY) -7600 + (ID) 2750
Total energy: -57746.0 ( -72.55 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_1SFE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SFE-query.scw
PDB file :
Tito_Scwrl_1SFE.pdb
: