Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLFAMIGSGGFIAPKHLQAIRDTGHFLDCSFDVHDSVGVLDEYFPQSEFFTNIE---DFEKHLEQSKAMGKEINYLSVCTPTHTHFDHIRFGLRNGMHVICEKPLVLDPSEIQELKDLEVKYQKRVFSLLPLRLHCDTLALKEKIKSELDKNPEKVFDITLTYISVQGKWYFSSWRADVNRSGGLATQMGVNIFDTLLYLFGGVKDKVINREEPDCVCGILFLEHAKIRWFFSIN----PEHMGVAKEKVYHKMILEGEEVNLTQSFDNLYIESYKQILAQGGFGLDDAAASIKLAYELRNLSLSEPNDDSHALCCKNKTDQ |
3OA2 Chain:A ((6-307)) | --FALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATA--LDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKVARE---SPHK-YEVDLTYITSRGNWYLKSWKGDPRKSFGVATNIGVHFYDMLHFIFGKLQRNVVHFTSEYKTAGYLEYEQARVRWFLSVDANDLPESVK-GKKPTYRSITVNGEEMEF-----DLHTTSYEEILAGRGYGIDDARHCVETVNTIRSAVIVPASDNEGHPFVA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179571 for 2327 contacts (-77.2/contact) +
2D Compatibility (PS) -31609 + (NN) -11703 + (LL) 1692
1D Compatibility (HY) -25600 + (ID) 5800
Total energy: -252591.0 ( -108.55 by residue)
QMean score : 0.594
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