Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEHNGHDKLNGVLRGFLGDSFTLDGKEGGLNMSKMLEFIKKEKPK----MNVLLMGATGVGKSSLINALFGKEITKTGVGKPITQHLEKYIDEEKGL-----ILWDTKGIEDKDY--HDTMQSIKKEMEDSFKTLDEKEAIDVAYLCVKETSSRVQERERELL-----SFAKHWNIPTIVVFTHTQAEAGDAFVQETKGIIDEEWGFKGFVRAYVRVNSVAFSFRGLKVPVEGLEELVDETKKCLSDAEKNKKRHFLSIQRVKIQERKQAMIEECKTIIHVASGAAGVAGLIPIPFSDALAIAPIQAGMIYKMNDAFGMDLDKSVGASLVAGLLGVTAVAQVGRTLVNGFLKFIPVVGSVAGGATAAVITEGIGFAYLKVLEKCFNDETGEVNLPGEVGMITSLFKENYLNLDTIKKLKP |
| 2J3E Chain:A ((20-172)) | ---------------------------------KLIEFFGKLKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVS---PFQAEGLRPVMVSRTMGGFTINIIDTPGLVEAGYVNHQALELIKGFLVN--------RTIDVLLYVDRLDVYAVDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSPPDELSYETFSSKRSDSLLKTIRAGSKMRKQEFEDSAIAVVYAENSGRCSKNDKDEKALPNGEAWIPNLVKAITDVATNQRKAIHV-------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31917 for 855 contacts (-37.3/contact) +
2D Compatibility (PS) -14650 + (NN) -2719 + (LL) 12444
1D Compatibility (HY) -13600 + (ID) 2100
Total energy: -52542.0 ( -61.45 by residue)
QMean score : 0.411
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