Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSPDVLLDSFKIALVKKDSKLAFSLIERLSLEQIKSLDLDALLSLKEMIAQSIELLEKEKEELQSQMHKAKQIQKFLS
1Q08 Chain:A ((41-63))
-----------------------------------------------------KGIVQERLQEVEARIAELQSMQRSLQ
General information:
TITO was launched using:
RESULT:
Template:
1Q08.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6387 for 84 contacts (76.0/contact) +
2D Compatibility (PS) -2710 + (NN) -2898 + (LL) 4780
1D Compatibility (HY) -1600 + (ID) 100
Total energy: 3859.0 ( 45.94 by residue)
QMean score : 0.775
(partial model without unconserved sides chains):
PDB file :
Tito_1Q08.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q08-query.scw
PDB file :
Tito_Scwrl_1Q08.pdb
: