Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFYQKIYTHKVVFSSLFFLLFLFNVETLLFSHFSDDFSQLFFLFENHVYDFIIKLDYLGLIGVSSIYLLALILKPFTLTRQKCACIGILCLSFYAWNFPIKNSSIALYVFYFALLGTLLWRFLGASMKQSFLPSMNICVVWVFASSLQSFRFLSVSDCVDFSLFILALFLLILVLIYHKRLFGLYEYANTLILIVGLCVVVLCSSMFIQTKEYYGMRLGFYFLGLLGWLLEYIHNTLRRLEHKI |
| 2HIP Chain:A ((60-70)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEGWCSVYAPAS-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HIP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -438 for 23 contacts (-19.0/contact) +
2D Compatibility (PS) -1002 + (NN) 1851 + (LL) 22200
1D Compatibility (HY) 400 + (ID) 150
Total energy: 22861.0 ( 993.96 by residue)
QMean score : -0.179
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