Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRLEVSNQAKLPTQFGEFCIQCFREKGSNGSKDHLV---IFTPNFP-QNPLVRLHSECLTGDALGSQKCDCGGALQMALERISKEG-GLVIYLRQEGRGIGLFNKVNAYALQDKGYDTIQANEMIGFKDDERDYSIAGEILEYYRIKKMRLLTNNPLKIAALEKYAE--VTRESLIVCANEHNQGYLEVKKLKMGHLL
4I14 Chain:A ((207-383))
-KHIERVAEARIPTRHGEFRAIGYTSIYEDVEHVALVRGEIAG---DGDDVLVRVHSECLTGDVFGSRRCDCGPQLDAALAMVAREGRGVVLYMR---------------------------------------YGIGAQILVDLGVRSMRLLTNNP------DGYGLHIIERVPLP----------------------
General information:
TITO was launched using:
RESULT:
Template:
4I14.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53354 for 812 contacts (-65.7/contact) +
2D Compatibility (PS) -12661 + (NN) -1537 + (LL) 4600
1D Compatibility (HY) -10400 + (ID) 2600
Total energy: -75952.0 ( -93.54 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_4I14.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I14-query.scw
PDB file :
Tito_Scwrl_4I14.pdb
: