Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKNKPTECPAGEKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVDPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLSKIHSILDEEFNPHKQQE
3S03 Chain:A ((16-160))
----------------------------------------------------------------------------------------------------------SVLEQIDQGSILKLPSNLLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLSKIHSILDNEFN------
General information:
TITO was launched using:
RESULT:
Template:
3S03.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53121 for 1033 contacts (-51.4/contact) +
2D Compatibility (PS) -16304 + (NN) -14888 + (LL) 7772
1D Compatibility (HY) -20000 + (ID) 6950
Total energy: -103491.0 ( -100.18 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_3S03.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S03-query.scw
PDB file :
Tito_Scwrl_3S03.pdb
: