Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQNIFSLLIQKKSYKKLETLLKLKKLKVFMPLSLQENLLFIFIKDSKLLFAFKDLWASKEFNQRFAKEISHFLNTQGHAC------GLDELDALEILGYVPK--DSLEKANFYAPIKKQAQFYRPSALGLFHNPIKDARLHECFEKARALIHYQRSFFEE
4EI8 Chain:A ((236-311))
------------------------------------------------------------------ASEFAQVINTPGVLSLAKLELKSNQLDTENPLGYLTQLGNALEKGVLYDTEREELESAKKSALSIVTSPLRAGRLYNFSFLNQMENFLKERTPYV
General information:
TITO was launched using:
RESULT:
Template:
4EI8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8758 for 308 contacts (-28.4/contact) +
2D Compatibility (PS) -6715 + (NN) 3825 + (LL) 6624
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -9224.0 ( -29.95 by residue)
QMean score : 0.139
(partial model without unconserved sides chains):
PDB file :
Tito_4EI8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EI8-query.scw
PDB file :
Tito_Scwrl_4EI8.pdb
: