Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSHYIELTEENFESTIKKG--VALVDFWAPWCGPCKMLSPVIDELASEYEGKAKICKVNTDEQEELSAKFGIRSIPTLLFTKDGEVVHQLVGVQTKVALKEQLNKLLG
4ULX Chain:A ((4-106))
----IEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFKNGQVVDRKVGAQPKEALKERIDKHL-
General information:
TITO was launched using:
RESULT:
Template:
4ULX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65888 for 737 contacts (-89.4/contact) +
2D Compatibility (PS) -10740 + (NN) -3452 + (LL) 144
1D Compatibility (HY) -10400 + (ID) 3050
Total energy: -93386.0 ( -126.71 by residue)
QMean score : 0.757
(partial model without unconserved sides chains):
PDB file :
Tito_4ULX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ULX-query.scw
PDB file :
Tito_Scwrl_4ULX.pdb
: