Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFLVKKIGVVIMILVCFLACSQESFIKMQKKAQEQENDGSKRPSYVDSDYEVFSETIFLQNMVYQPIEERNAFFQLTKDEDNSFNPENSVILLNEPSDNSEKNLLSYPNDPNNNEDNANNSQKNPFLYKPKRKTKNPKLIEYSQQDFYPLKNGDIIMSKEGDQWLIEIQSKALKRFLKDQNDKDRQIQTFTFNDTKTQIAQIKGKISSYVYTTNNGSLSLRPFYESFLLEKKSDNVYTIENKALDTMEISKCQMVLKKHSTDKLDSQHKAISIDLDFKKERFKSDTELFLECLKES |
3TND Chain:B ((31-59)) | ------------------------------------------------------------------------------------------------------------------------------------------------------NVKRVEVIAVGRTRIITPAGETWDEWFDGHSVSTDFMDNREQPG------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TND.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 799 for 137 contacts (5.8/contact) +
2D Compatibility (PS) -3068 + (NN) -692 + (LL) 15168
1D Compatibility (HY) -1600 + (ID) 100
Total energy: 10507.0 ( 76.69 by residue)
QMean score : 0.193
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