Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKAEFIDLVKKAGKYNSKREAEEAINAFTLAVETALSKGESVELVGFGKFETAEQKGKEGKVPGSDKTYKTEDKRVPKFKPGKILKQKVEEGK
4QJN Chain:A ((1-89))
MNKTDLINAVAEQADL-TKKEAGSAVDAVFESIQNSLAKGEKVQLIGFGNFEVRERAARKGRNPQTGKEIDIPASKVPAFKAGKALKDAVK---
General information:
TITO was launched using:
RESULT:
Template:
4QJN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7509 for 468 contacts (16.0/contact) +
2D Compatibility (PS) -9505 + (NN) -374 + (LL) -44
1D Compatibility (HY) -6000 + (ID) 1700
Total energy: -10114.0 ( -21.61 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_4QJN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QJN-query.scw
PDB file :
Tito_Scwrl_4QJN.pdb
: