Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDDLIQKEFLAHKEALEKSLESLQDALKQSVHLLIETLENQGKILICGNGGSASDAQHFAAELTGRYKLERKGLSVISLSTDTSALTAIANDYGYEEVFARQVEALGNKEDILIGISTSGNSKNVLKAYEKAKDLGMKTLSLAGRDGGKMKPL---SDIALIVPSGDTPRIQEMHILMIHILCDCIERHFARKN
3BJZ Chain:A ((9-194))
-----IRQLFQASIETKQQALEVLPPYIEQASLVMVNALLNEGKILSCGNGGSAGDAQHFSSELLNRFERERPSLPAVALT--------------YNEVFSKQIRALGQPGDVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLLLPEDVEIRVPSKITARIQEVHLLAIHCLCDLIDRQLFG--
General information:
TITO was launched using:
RESULT:
Template:
3BJZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107390 for 1405 contacts (-76.4/contact) +
2D Compatibility (PS) -18654 + (NN) -12011 + (LL) 1308
1D Compatibility (HY) -16000 + (ID) 4100
Total energy: -156847.0 ( -111.63 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_3BJZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BJZ-query.scw
PDB file :
Tito_Scwrl_3BJZ.pdb
: