Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHEYSVVSSLIALCEEHAKKNQAHKIERVVVGIGERSAMDKSLFVSAFETFREESLVCKDAILDIVDEKVELECKDCSHVFKPNALDYGVCEKCHSKNVIITQGNEMRLLSLEMLAE
5AUP Chain:A ((1-81))
MHEWALADAIVRTVLDYAQREGASRVKAVRVVLGELQDVAEDIVKFAMEQLF-AGTIAEGAEIEFVEEEAVFKCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSH
General information:
TITO was launched using:
RESULT:
Template:
5AUP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50045 for 466 contacts (-107.4/contact) +
2D Compatibility (PS) -8412 + (NN) -1285 + (LL) 104
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -66088.0 ( -141.82 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_5AUP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5AUP-query.scw
PDB file :
Tito_Scwrl_5AUP.pdb
: