Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGLIGVVEKISALEAHIEVQGVVYGVQVSMRT-AALLQTGQKARLKILQVIKEDAHLLYGFLEESEKILFERLLKINGVGGRIALAILSSFSPNEFENIIATKEVKRLQQVPGIGKKLADKIMVDLIGFF--------IQDENRPARN----EVFLALESLGFKSAEINP-VLKTLKPHLSIEAAIKEALQQLRS
1HJP Chain:A ((19-200))
------------------IEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLF----------DAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL-
General information:
TITO was launched using:
RESULT:
Template:
1HJP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115214 for 997 contacts (-115.6/contact) +
2D Compatibility (PS) -16443 + (NN) -4972 + (LL) 2496
1D Compatibility (HY) -10000 + (ID) 3350
Total energy: -147483.0 ( -147.93 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_1HJP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HJP-query.scw
PDB file :
Tito_Scwrl_1HJP.pdb
: