Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTIETSKKFDKDLKILVKNGFDLKLLYKVVGNLATEQPLEPKYKDHPLKGALKDFRECHLKPDLLLVYQIKKQENTLFLVRLGSHSELF
4LTT Chain:A ((1-88))
MLKLNLKKSFQKDFDKLLLNGFDDSVLNEVILTLRKKEPLDPQFQDHALKGKWKPFRECHIKPDVLLVYLVKDDE--LILLRLGSHSELF
General information:
TITO was launched using:
RESULT:
Template:
4LTT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66710 for 596 contacts (-111.9/contact) +
2D Compatibility (PS) -9109 + (NN) -161 + (LL) -28
1D Compatibility (HY) -12000 + (ID) 2400
Total energy: -90408.0 ( -151.69 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_4LTT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LTT-query.scw
PDB file :
Tito_Scwrl_4LTT.pdb
: