Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQRKESLQNNPNLSKKDIKIVEKILSKNDIKAAEMKERYLKEGLYVLNFMSSPGSGKTTMLENLAD-FKD-FKFCVVEGDLQTNRDADRLRKKGVSAHQITTGEACHLEASMIEGAFDLLKDEGALEKSDFLIIENVGNLVCPSSYNLGAAMNIVLLSVPEGDDKVLKYPTMFMCADAVIISKADMIEVFNFRVSQVKEDMQKLKPEAPIFLMSSKDPKSLEDFKNFLLEKKRENYQSTHSF
2HF9 Chain:A ((16-215))
-----------------------KDILKANKRLADKNRKLLNKHGVVAFDFMGAIGSGKTLLIEKLIDNLKDKYKIACIAGDVIAKFDAERMEKHGAKVVPLNTGKECHLDAHLVGHALEDLN----LDEIDLLFIENVGNLICPADFDLGTHKRIVVISTTEGDDTIEKHPGIMKTADLIVINKIDLADAVGADIKKMENDAKRINPDAEVVLLS---LKTMEGFDKVLEFIEKSVKEVK---
General information:
TITO was launched using:
RESULT:
Template:
2HF9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120902 for 1702 contacts (-71.0/contact) +
2D Compatibility (PS) -21344 + (NN) -8276 + (LL) 1728
1D Compatibility (HY) -16800 + (ID) 3550
Total energy: -169144.0 ( -99.38 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_2HF9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HF9-query.scw
PDB file :
Tito_Scwrl_2HF9.pdb
: