Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKRASFVEVNTHSLRHNFNAVKNIVPKDACVMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDEALELRSHFSQTPILILGYSPNTNASMLIDNDLSAMVFSLEQ-AEVFSQMALKSQKRLKVHLKIDTGMHRLGLEPTFKSIETIKKIRALKGLEVEGIFTHLSNAD--SNIKTHAKNQMKVFNAFLEQLLDQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNEMKESSQTILKNVISLKARIVQIKRVKKGEFIGYGEHFYTNEETLVGVLALGYADGLVRALGNRIQVAINNQLAPLIGKVCMDQCFVKLNDIEAKEGDEVILFGDKSTKANDASEIATLLNTIPYETISTLSKRLERVYV |
| 3OO2 Chain:A ((10-371)) | ---RSAYMNVDLNAVASNFKVFSTLHP-NKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKLDTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADEPGDMTTEQYQRFK-------DMVNEAIKPEYIHCQNSAGSLLM----DCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANVVQTKTLQAGESVSYG--YTATDPTTIALLPIGYADGYLRIMQGSF-VNVNGHQCEVIGRVCMDQTIVKVPD-QVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNLSRRLPRIYH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -224443 for 3036 contacts (-73.9/contact) +
2D Compatibility (PS) -38091 + (NN) -2092 + (LL) 1508
1D Compatibility (HY) -30000 + (ID) 6600
Total energy: -299718.0 ( -98.72 by residue)
QMean score : 0.520
|
|
|