Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFMRKSYRAVSVDSVTIKSIKAKLGKNHYHKVSGSHQVGGAHKVISSFN---TKNPFFIRQHLKSH
2CL4 Chain:X ((170-195))
--------------------------------LSGGHTIGAAHKEASGFEGPWTSNPLIFDNSYFTE
General information:
TITO was launched using:
RESULT:
Template:
2CL4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1528 for 86 contacts (17.8/contact) +
2D Compatibility (PS) -2389 + (NN) -1163 + (LL) 2608
1D Compatibility (HY) -800 + (ID) 600
Total energy: -816.0 ( -9.49 by residue)
QMean score : -0.067
(partial model without unconserved sides chains):
PDB file :
Tito_2CL4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CL4-query.scw
PDB file :
Tito_Scwrl_2CL4.pdb
: