Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKTETDNFNKQDKHKLDYRKINYESKEIDDGKFIRIGDEVNHIFIEKAKINRGYLQNPKHKRTWWSLWLYK-KPSDDALDIKVLDVFDDGKYTY-FRYDRDQAFSKFPYTYKVVDGYDNPINSRVVGNYIIAEDISKKWTLRSGKEYVCVRRD-KRKYQKSRDFMRLKRLLEQDEAMKAKRNNMHLIEDTTP-QPKNAISVTELLAQIKNQTPSKECRALNEEEVKTLEEVKNIIKTPKPLQKDLKKNAKKHTIKTQYCVPIPYIERLKTTDGLEKHQKGLNNTKKQIQANPIEEIKENKK |
| 3L8C Chain:A ((333-506)) | -----------------------------EDGKELSSGEQ-GEIIVTGPAVSKGYLNNP--EKTAEAFFTFKGQPAYHTGDIGSLT--EDNILLYGGRLDFQIK-------IELEDVSQQLNQSPMVASAVAVPRYNKEHK---LLAYIVVKDGVKERFDRELELTKAIKASVKDHMMSYMMPSKFLYRDSLPLTPNGKIDIKTLINEVN-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4729 for 1001 contacts (-4.7/contact) +
2D Compatibility (PS) -17007 + (NN) 1900 + (LL) 8944
1D Compatibility (HY) -6400 + (ID) 1750
Total energy: -19042.0 ( -19.02 by residue)
QMean score : 0.336
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