Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFFDTLMGMFVEPSQKVAKSLAEHVGSFFHAQLILNTIITILFMIWAYKRVKEGDMFEFKTAMGVVVFIAFVGFINWGIKNPNDFNTYFINTIFYPSEKLAILIAQSLNDGLEIPTNTNLSPSEIFSIGNLASSAYAMIVNLWDNAFDGINMFNWLTMIPKIIMFFLVILGELLFLGLLLIIVLLVTAEIFMWSALGLIVLPLGLIPQTKGMLFSYLKKLISLTLYKPCMMLVAFFNY---GIIYKVNTLIPTKHEVTQGFYGNADKMANEGKIIDV------FGNVLKGDWNSYIAHSSIVGFLTIIVLGSVICFFLVKRVPDFINNIFGTSGGVGAVTEMMQKIGMTIGGAVFGGSAVMVANQVKQAYQSAGGGLAGLQAGAKAFGLGAISGGASAMANHRSVKAGVKHFVASVKSGFGFDNDKNNK |
| 1FMK Chain:A ((214-287)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15900 for 236 contacts (-67.4/contact) +
2D Compatibility (PS) -6473 + (NN) 685 + (LL) 26720
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -18.0 ( -0.08 by residue)
QMean score : 0.155
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