Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRLTAK--EAEKLLLQNGFVFSRQ-KGSHRIYVKDKIRQVLPFHSGEILHPKIVKEIMENTLK
1TBX Chain:A ((36-72))
FPMSTATFYDAKKFLIQEGFVKERQERGEKRLYLTEKGKLFAISLKTAIETYKQIKKRHHH---
General information:
TITO was launched using:
RESULT:
Template:
1TBX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3259 for 131 contacts (-24.9/contact) +
2D Compatibility (PS) -3931 + (NN) -4313 + (LL) 368
1D Compatibility (HY) -400 + (ID) 100
Total energy: -11635.0 ( -88.82 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_1TBX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TBX-query.scw
PDB file :
Tito_Scwrl_1TBX.pdb
: