Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVIVLVVDSFKDTSNGTSMTAFRFFEALKKRGHAMRVVAPHVDNLGSEEEGYYNLKERYIPLVTEISHKQHILFAKPDEKILRKAFKGADMIHTYLPFLLEKTAVKIAREMRVPYIGSFHLQPEHISYNMKLGQFSWLNTMLFSWFKSSHYRYIHHIHCPSKFIVEELEKYNYGGKKYAISNGFDPMFKFEHPQKSLFDTTPFKIAMVGRYSNEKNQSVLIKAVALSRYKQD------IVLLLKGKGPDEKKIKLLAQKLGVKTEFGFVNSH---ELLEILKTCTLYAHTANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERSLF----EPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLENSVIQIEKVYEEAIKDFKNNPNLFKTLS |
| 3C4Q Chain:A ((226-408)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VAFVGRLQPFKGPQVLIKAVA-ALFDRDPDRNLRVIICGGP------TYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASG-TPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATL---LDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANE----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C4Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -91505 for 1252 contacts (-73.1/contact) +
2D Compatibility (PS) -17963 + (NN) -11805 + (LL) 15592
1D Compatibility (HY) -10400 + (ID) 2250
Total energy: -118331.0 ( -94.51 by residue)
QMean score : 0.530
|
|
|